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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954420.1_cds_XP_016493287.1_83412
CDS Infomation

[gene=LOC107812654] [db_xref=GeneID:107812654] [protein=3-hydroxyisobutyryl-CoA hydrolase 1-like] [protein_id=XP_016493287.1] [location=complement(join(5774..5911,6004..6045,6115..6216,7256..7354,7483..7543,7925..8046,9001..9086,10015..10099,10468..10551,10639..10718,11650..11713,12751..12819,13466..13546,13785..13823))] [gbkey=CDS]
Sequence

ATGGCTCCAACCTCTTCCATCAATGGCGGAGCCGATCAGGTTTTGGTGGAGGAGATATCA
AGTGTTAGAACATTCATATTAAATAGGCCTAAGCAGCTCAATGCTCTTTCTCATCAAATG
ATATCTCGGCTGTTGGAACTTTTCCATGCTAGTGAAAGAGATTCTAATGTGAAGATTATA
ATATTGAAGGGAAATGGAAGGGCTTTCTGTGCTGGTGGTGATGTTACAGCTGTTGTTCAT
AATGTTCGCCGGGGTAACTGGAAACTGGGTGCTGATTATTTCCGCGAAGAGTTCACCCTT
AACTATGTGATGGCAACATATAGCAAACCCCAGGTCTCCATCCTTAATGGAATTGTCATG
GGAGGTGGAGCTGGTGCTTCTGTACATGGTAGATTTCGGGTTGCAACAGAGAAGTCGGTT
TTTGCTATGCCTGAAACAGCTTTGGGACTCTTTCCTGATGTAGGTGCCTCTTACTTTTAT
TCGAGGCTTCCAGGATTCTTCGGGGAATATGCTGGTCTTACTGGTGCTAGGTTGGATGGT
GCCGAAATGCTTGCTTGTGGTCTAGCAACTCACTTTGTACCTTCAGAGAGGTTGCCACTT
TTAGAACAAGCACTAGTTAAAGTCAATACGAGTGATCCAGATGTTATTTCGACCATCATT
AGTCGGTTCTCCCACATACCAAAGTTGAAAGAAGGAAGTTCTTACCACAAGATGAAGATC
ATTGATCGCTGTTTCTCTCGAAGAACAGTCGAAGAAATCATATCTGCTCTTGAAAGTGAG
GCTTTGAACAAGAATGATGATTGGGTCTCTTCTACCATCCAATCGTTAAAGAAAGCATCC
CCTACAAGTCTTAAAATCTCATTGAGATCAATAAGAGAAGGGAGGTTGCAAGGTGTTGGT
AGCTGCCTTATCCGAGAGTATAGGATGGTTTGTCATGTGTTGATGGGAGAATTTAGCAAG
GATTTTTTCGAGGGATGCAGAGCTTTACTCATCGACAAGGATAGAAATCCTAAGTGGGAG
CCGTCTAGACTGGACCTAATTAGAGATGATGATGTTGACTGTTACTTCTCCAAGATAGAT
GATGAAGATTGGGAAGACCTAAAGCTCCCTCCCAGATCAAACTTGCCTCCGTATGCCATT
GCGAAGCTTTAA

Peptide Sequence

PEP ID

XP_016493287.1
PEP Infomation

PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1-like [Nicotiana tabacum]
Sequence

MAPTSSINGGADQVLVEEISSVRTFILNRPKQLNALSHQMISRLLELFHASERDSNVKII
ILKGNGRAFCAGGDVTAVVHNVRRGNWKLGADYFREEFTLNYVMATYSKPQVSILNGIVM
GGGAGASVHGRFRVATEKSVFAMPETALGLFPDVGASYFYSRLPGFFGEYAGLTGARLDG
AEMLACGLATHFVPSERLPLLEQALVKVNTSDPDVISTIISRFSHIPKLKEGSSYHKMKI
IDRCFSRRTVEEIISALESEALNKNDDWVSSTIQSLKKASPTSLKISLRSIREGRLQGVG
SCLIREYRMVCHVLMGEFSKDFFEGCRALLIDKDRNPKWEPSRLDLIRDDDVDCYFSKID
DEDWEDLKLPPRSNLPPYAIAKL

Transcript Sequence

Gene sequence data has not been registered.